Published September 6, 2018
| Version v1
Journal article
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Detecting past and ongoing natural selection among ethnically Tibetan women at high altitude in Nepal
Creators
- 1. University of Chicago
- 2. Patan Hospital
- 3. Mountain Medicine Society of Nepal
- 4. Case Western Reserve University
- 5. Washington University in St. Louis
- 6. Dartmouth College
Description
Adaptive evolution in humans has rarely been characterized for its whole set of components, i.e. selective pressure, adaptive phenotype, beneficial alleles and realized fitness differential. We combined approaches for detecting polygenic adaptations and for mapping the genetic bases of physiological and fertility phenotypes in approximately 1000 indigenous ethnically Tibetan women from Nepal, adapted to high altitude. The results of genome-wide association analyses and tests for polygenic adaptations showed evidence of positive selection for alleles associated with more pregnancies and live births and evidence of negative selection for those associated with higher offspring mortality. Lower hemoglobin level did not show clear evidence for polygenic adaptation, despite its strong association with an EPAS1 haplotype carrying selective sweep signals.
Data availability
Genotype data and GWAS summary statistics are available from dryad digital repository (https://doi.org/10.5061/dryad.bp46m). Phenotype data are available from dryad digital repository (https://doi.org/10.5061/dryad.gc2n2). Sequence data are deposited to SRA under the accession number PRJNA420511.
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Additional details
Identifiers
- DOI
- 10.1371/journal.pgen.1007650
- Other
- oai:uchicago.tind.io:6360
Related works
- Cites
- https://doi.org/10.1101/223081 (URL)
Funding
- National Science Foundation
- 1153911
- Dartmouth
- Rockefeller Center
- Dartmouth
- Claire Garber Goodman Fund
- National Institutes of Health
- 1R01HL119577
- National Science Foundation
- 1153911
- Cancer Center
- P30 CA014599