Published October 1, 2023 | Version v1
Journal article Open

Multi-model sequential analysis of MRI data for microstructure prediction in heterogeneous tissue

Description

We propose a general method for combining multiple models to predict tissue microstructure, with an exemplar using in vivo diffusion-relaxation MRI data. The proposed method obviates the need to select a single 'optimum' structure model for data analysis in heterogeneous tissues where the best model varies according to local environment. We break signal interpretation into a three-stage sequence: (1) application of multiple semi-phenomenological models to predict the physical properties of tissue water pools contributing to the observed signal; (2) from each Stage-1 semi-phenomenological model, application of a tissue microstructure model to predict the relative volumes of tissue structure components that make up each water pool; and (3) aggregation of the predictions of tissue structure, with weightings based on model likelihood and fractional volumes of the water pools from Stage-1. The multiple model approach is expected to reduce prediction variance in tissue regions where a complex model is overparameterised, and bias where a model is underparameterised. The separation of signal characterisation (Stage-1) from biological assignment (Stage-2) enables alternative biological interpretations of the observed physical properties of the system, by application of different tissue structure models. The proposed method is exemplified with human prostate diffusion-relaxation MRI data, but has potential application to a wide range of analyses where a single model may not be optimal throughout the sampled domain.

Data availability

Data are available on application to the corresponding author.

Files

Multi-model-sequential-analysis-of-MRI-data-for-microstructure-prediction-in-heterogeneous-tissue.pdf

Files (5.6 MB)

Additional details

Identifiers

DOI
10.1038/s41598-023-43329-x
Other
oai:uchicago.tind.io:8366

Funding

National Institutes of Health
R01 CA228036

UChicago Information

Division(s)
Biological Sciences Division
Department(s)
Pathology, Radiology
Center(s) or Institute(s)
Sanford J. Grossman Center of Excellence in Prostate Imaging and Image Guided Therapy